Cited By (per year )
Cited By (per year )
RPG Interface Lab Projects
Published Projects
01. Quantum Mechanical Insights into Lignocellulosic Biomass Fractionation through an NaOH-Catalyzed Triton-X 100 System: In Vitro and In Silico Approaches
Abstract:Despite the notable efficacy of the NaOH-catalyzed Triton-X 100 system in fractionating lignocellulosic biomass (LCB), a significant gap remains in understanding the mechanistic pathways that drive this process. This study uses a dual-faceted approach, combining laboratory experiments with computational simulations to elucidate the mechanisms of delignification and lignin-carbohydrate complex (LCC) disruption. Under optimized conditions, both cellulose and hemicellulose recoveries reached around 88.5%, with delignification attaining an impressive 92.3%. Substantial changes in the physicochemical properties of the pretreated substrates were observed, including the removal of lignin and LCC-associated linkages, an enhanced crystallinity index (1.2–1.9 times), and an increase in surface area (1.2–1.4 times) compared to controls.This pretreatment system also facilitated frequent lignin depolymerization, leading to pronounced dissolution of syringyl and ferulate units. Furthermore, mechanical analyses demonstrated that this system promoted the highest interaction energy formations during LCB fractionation compared to individual NaOH or Triton-X 100 treatments alone.
02. Machine learning-driven optimization of biphasic pretreatment conditions for enhanced lignocellulosic biomass fractionation

Abstract:Biphasic pretreatment efficiently fractionates lignocellulosic biomass (LCB) and holds significant potential for industrial applications. While various studies have explored parameters to improve its efficiency, the lack of an optimal framework to balance these factors restricts scalability and compromises cost-effectiveness. This study introduces a machine learning (ML) model to optimize biphasic pretreatment conditions for LCB fractionation. By leveraging ML’s capacity to uncover intricate relationships within extensive datasets, we conducted a comprehensive analysis incorporating key parameters. Feature importance analysis highlighted the critical influence of these parameters on cellulose degradation, hemicellulose removal, and delignification. The Gradient Boosted Regression (GBR) model outperformed others, achieving robust predictive metrics with R2 values from 0.71 to 0.94 and demonstrating lower error levels (RMSE: 5.27–9.51; MAE: 3.73–7.49) compared to other models during validation. Solid loading and temperature were identified as the most influential factors, contributing 23.7 % and 21.3 % to cellulose degradation, respectively. For hemicellulose removal, solid loading accounted for 41.8 %, while temperature contributed 25.3 % to delignification.
03. The State-of-the-Art on Exploring Polysaccharide-Protein Interactions and Its Mechanisms, Stability, and Their Role in Food Systems

Abstract:The compatibility and assembly of dietary soft matter components are crucial in enhancing food products’ stability, nutrition, texture, flavor, and shelf life. This review emphasizes the importance of these interactions, particularly in natural polymers like polysaccharides and proteins, due to their biodegradability, versatility, and sensory contributions. The structural behavior of these polymers exhibits consolable interactions or phase separation depending on molecular arrangements, which is pivotal in determining the microstructure of food matrices. The delicate balance between attractive and repulsive forces facilitates effective self-assembly processes, while weak interactions enable essential structural adaptations. Conversely, excessive intermolecular forces or restricted molecular dynamics can result in functional instability, such as phase separation or structural collapse. This review provides an indepth examination of physical and chemical methodologies to investigate the compatibility and interactions of dietary soft matter components. Techniques such as phase modeling, turbidity analysis, microscopy, thermal analysis, rheology, and spectroscopy are employed to evaluate these materials’ suitability and assembly characteristics. By analyzing these methodologies, the review emphasizes the importance of understanding soft matter interactions for developing functional food products with improved performance and stability. Furthermore, it identifies the current challenges and limitations, offering insights into future directions for advancing food science and technology.
04. Harnessing the potential of biphasic solvent systems in lignocellulosic biomass fractionation through computational insights

Abstract:Biphasic solvent systems have emerged as a transformative approach for the efficient fractionation of lignocellulosic biomass (LCB), driving substantial progress in biofuel and biochemical production. By precisely partitioning lignin into the organic phase and hemicellulose into the aqueous phase while maintaining cellulose within the solid fraction, biphasic systems present a sophisticated and integrative strategy for LCB processing. This dual-phase approach achieves superior product separation and significantly enhances economic viability through the recyclability of solvents and catalysts. Several biphasic systems, including those employing 2-methyltetrahydrofuran, immiscible alcohol-based systems (butanol, pentanol, and phenoxyethanol), and ketones (Methyl isobutyl ketone), have been developed for LCB fractionation. Among these, immiscible alcohol-based systems have emerged as the most effective, demonstrating the ability to minimize cellulose degradation (1.0–30.0%) while optimizing the removal of hemicellulose (80.0–98.0%) and lignin (65.0–92.0%).
05. Machine learning-driven optimization of pretreatment and enzymatic hydrolysis of sugarcane bagasse: Analytical insights for industrial scale-up

06. Role of in situ surfactant modification of lignin structure and surface properties during glycerol pretreatment in modulating cellulase-lignin binding affinities

07. In-depth recognition of mixed surfactants maintaining the enzymatic activity of cellulases through stabilization of their spatial structures

08.Unveiling the mechanisms of mixed surfactant synergy in passivating lignin-cellulase interactions during lignocellulosic saccharification

09. The experimental significance of isorhamnetin as an effective therapeutic option for cancer: A comprehensive analysis

10. Unraveling the mechanisms underlying lignin and xylan dissolution in recyclable biphasic catalytic systems
11. New trends in microbial lipid-based biorefinery for fermentative bioenergy production from lignocellulosic biomass
12. WGS-based screening of the co-chaperone protein DjlA-induced curved DNA binding protein A (CbpA) from a new multidrug-resistant zoonotic mastitis-causing Klebsiella pneumoniae strain: a novel molecular target of selective flavonoids
13. Target-specificity of different amyrin subunits in impeding HCV influx mechanism inside the human cells considering the quantum tunnel profiles and molecular strings of the CD81 receptor: a combined in silico and in vivo study
14. Oncoinformatic screening of the gene clusters involved in the HER2-positive breast cancer formation along with the in silico pharmacodynamic profiling of selective long-chain omega-3 fatty acids as the metastatic antagonists
15. Target specificity of selective bioactive compounds in blocking a-dystroglycan receptor to suppress Lassa virus infection: an in silico approach
ABSTRACT
16. In ovo inoculation of duck embryos with different strains of Bacillus cereus to analyse their synergistic post-hatch anti-allergic potentialities
ABSTRACT
Background: Bacillus cereus is a Gram-positive, facultative anaerobic bacteria with few strains reported to be used as probiotics for animals and birds in recent times if the doses are formulated properly.
Objectives: To analyse the synergistic anti-allergic potentiality of different Bacillus cereus strains on experimental in ovo and in vitro duck model, as probiotic immune stimulant.
Materials and methods: Different strains of Bacillus cereus from 29 isolates were identifiedthrough 16S rRNA gene sequencing from the milk samples of buffalo breeds of South Asia. The probiotic properties were tested in aspects of gram staining, catalase test, coagulase, test, bile salt tolerance, pH tolerance and phenol tolerance test.
17. Molecular identification of a Bacillus cereus strain from Murrah buffalo milk showed in vitro bioremediation properties on selective heavy metals
ABSTRACT 
This study aims for molecular identification of naturally growing Bacillus cereus strain from a unique source, able to survive, and alleviate heavy metals from the nature.
Materials and Methods:
18. Molecular optimization, docking, and dynamic simulation profiling of selective aromatic phytochemical ligands in blocking the SARS-CoV-2 S protein attachment to ACE2 receptor: an in silico approach of targeted drug designing
19. A Comprehensive Analysis and Anti-Cancer Activities of Quercetin in ROS-Mediated Cancer and Cancer Stem Cells
20. ANTIVIRAL EFFECTS OF BACTERIOCIN AGAINST ANIMAL-TO-HUMAN TRANSMITTABLE MUTATED SARS-COV-2: A SYSTEMATIC REVIEW
21. Employment-related musculoskeletal complications experienced by the physical therapists in Bangladesh: a comprehensive cross-sectional case study
22. Catabolic profiling of selective enzymes in the saccharification of non-food lignocellulose parts of biomass into functional edible sugars and bioenergy: An in silico bioprospecting
23. Point-specific interactions of isovitexin with the neighboring amino acid residues of the hACE2 receptor as a targeted therapeutic agent in suppressing the SARS-CoV-2 influx mechanism
24. Quantitative analysis of the factors influencing IDA and TSH downregulation in correlation to the fluctuation of activated vitamin D3 in women
25. Active site-specific quantum tunneling of hACE2 receptor to assess its complexing poses with selective bioactive compounds in co-suppressing SARS-CoV-2 influx and subsequent cardiac injury
26. An experimental analysis of different point specific musculoskeletal pain among selected adolescent-club cricketers in Dhaka City
27. The Pros and Cons of Selective Renewable Energy Technologies for Generating Electricity in the Perspective of Bangladesh: A Survey-Based Profiling of Issues
28. Original Article Effect of physical exercise and routine intervals on LBP assessment using VAS, OLBPDQ, and RMQ among professional motorbike riders in Dhaka city
29. Molecular identification, characterization, and antagonistic activity profiling of Bacillus cereus LOCK 1002 along with the in-silico analysis of its presumptive bacteriocins

Objectives: This research aimed to isolate, identify, and characterize a new strain of Bacillus cereus through different molecular biology approaches so that it could be further studied for therapeutic purposes against selective enteric pathogens.
Materials and Methods: Pure isolates of B. cereus were prepared from buffalo yogurt samples in REMBA medium. Initially, the morphological, physiological, and biochemical properties were studied accordingly. Following the tests, the molecular identification for the strain identification was conducted through plasmid DNA extraction, PCR, agarose gel electrophoresis, and 16S rRNA sequencing up to 1.37 kb. Afterward, the antibiotic sensitivity [Epsilometer test (E-Test)] and anti fungal activity were tested considering different concentrations. Being classified from the aforementioned tests, a comprehensive antimicrobial activity test was conducted using the cell-free-su pernatant (CFS) of the test strain against selective enteric pathogens in humans in vitro